If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ), 'gf_id' => 'HOM05D000540', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000540' ), 'data_identifier' => 'HOM05D000540', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000540', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1013', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p31250' => 'bna', 'A03p43380' => 'bna', 'A05p04180' => 'bna', 'A07p08550' => 'bna', 'Aa31LG8G10410' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3450' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.180' => 'aag', 'Actinidia18404' => 'ach', 'Actinidia34810' => 'ach', 'Actinidia34936' => 'ach', 'Ah.08g216160' => 'amhyb', 'Ah.10g027220' => 'amhyb', 'Ah.10g027300' => 'amhyb', 'Ah.10g027430' => 'amhyb', 'Ah.10g027660' => 'amhyb', 'Ah.10g027740' => 'amhyb', 'Ah.10g029010' => 'amhyb', 'Ah.11g047020' => 'amhyb', 'AL1G45030' => 'aly', 'AL1G45040' => 'aly', 'AL1G45050' => 'aly', 'AL2G20490' => 'aly', 'AL2G20500' => 'aly', 'AL2G20510' => 'aly', 'AL2G21770' => 'aly', 'AL2G21780' => 'aly', 'AL4G23550' => 'aly', 'AL4G42940' => 'aly', 'AL8G10730' => 'aly', 'Aqoxy3G00098' => 'aox', 'Aqoxy7G01702' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1ZI984' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3CPC1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3FVF9K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.738EIZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8W03LL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9Z11CF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EB2RZG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EDF11L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPYN1F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GZ3JGQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HY1JL2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J235DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J6NC10' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LF45NH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RCVY9V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RX2F0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SV4NE2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UAA9PJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VYJ9P8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WZXK6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4SEM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YHR3P6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YX1079' => 'arhy', 'AT2G44065' => 'ath', 'AT5G47320' => 'ath', 'ATCG00830' => 'ath', 'ATCG00840' => 'ath', 'ATCG01300' => 'ath', 'ATCG01310' => 'ath', 'ATR0258G002' => 'atr', 'ATR0661G283' => 'atr', 'ATR1136G098' => 'atr', 'Atru.chr1.3246' => 'acertr', 'Atru.chr3.1907' => 'acertr', 'Atru.chr6.755' => 'acertr', 'Atru.chr7.1082' => 'acertr', 'AUR62008384' => 'cqu', 'AUR62021714' => 'cqu', 'BcaB01g03332' => 'bca', 'BcaB01g03342' => 'bca', 'BcaB02g08923' => 'bca', 'BcaB04g20419' => 'bca', 'BcaB06g26544' => 'bca', 'BcaB06g29514' => 'bca', 'BcaC01g03363' => 'bca', 'BcaC01g05188' => 'bca', 'BcaC02g07137' => 'bca', 'BcaC02g12343' => 'bca', 'BcaC06g35575' => 'bca', 'BcaNung05007' => 'bca', 'BNapus_Darmor_BZH_scaffold_253p00380' => 'bna', 'BNapus_Darmor_BZH_scaffold_253p00390' => 'bna', 'BNapus_Darmor_BZH_scaffold_287p00280' => 'bna', 'BolC1t03932H' => 'bol', 'BolC2t10580H' => 'bol', 'BolC2t10581H' => 'bol', 'BolC2t10582H' => 'bol', 'BolC3t15288H' => 'bol', 'BolC3t17591H' => 'bol', 'BolC4t22126H' => 'bol', 'BolC7t41705H' => 'bol', 'BolC7t41706H' => 'bol', 'BolC7t41830H' => 'bol', 'BolC9t56905H' => 'bol', 'BolSC29t60442H' => 'bol', 'BolSC29t60487H' => 'bol', 'BolSC29t60520H' => 'bol', 'BolSC29t60533H' => 'bol', 'BolSC29t60565H' => 'bol', 'BolSC29t60614H' => 'bol', 'BolSC29t60615H' => 'bol', 'BolSC35t60674H' => 'bol', 'BolSC35t60675H' => 'bol', 'BolSC35t60725H' => 'bol', 'BolSC37t60779H' => 'bol', 'BolSC44t60841H' => 'bol', 'BolSC45t60887H' => 'bol', 'BolSC45t60888H' => 'bol', 'BolSC45t60927H' => 'bol', 'BolSC46t60976H' => 'bol', 'BolSC47t61076H' => 'bol', 'BolSC49t61160H' => 'bol', 'BolSC49t61208H' => 'bol', 'BolSC56t61242H' => 'bol', 'BolSC56t61243H' => 'bol', 'BolSC56t61244H' => 'bol', 'BraA01t03249Z' => 'bra', 'BraA03t13476Z' => 'bra', 'BraA05t19404Z' => 'bra', 'BraA06t25387Z' => 'bra', 'BraA07t28644Z' => 'bra', 'BraSC103t45440Z' => 'bra', 'BraSC103t45441Z' => 'bra', 'BraSC103t45442Z' => 'bra', 'BraSC103t45488Z' => 'bra', 'BraSC138t45549Z' => 'bra', 'BraSC138t45550Z' => 'bra', 'BraSC143t45640Z' => 'bra', 'BraSC143t45674Z' => 'bra', 'BraSC179t45788Z' => 'bra', 'BraSC25t45890Z' => 'bra', 'BraSC58t46445Z' => 'bra', 'BraSC58t46472Z' => 'bra', 'BraSC59t46521Z' => 'bra', 'BraSC59t46566Z' => 'bra', 'BraSC59t46567Z' => 'bra', 'C01p39820' => 'bna', 'C03p38140' => 'bna', 'C03p38150' => 'bna', 'C03p38160' => 'bna', 'C03p53300' => 'bna', 'C04p04950' => 'bna', 'C06p21370' => 'bna', 'C07p13360' => 'bna', 'C09p24800' => 'bna', 'C09p40100' => 'bna', 'CAN.G1109.8' => 'can', 'CAN.G114.6' => 'can', 'CAN.G114.7' => 'can', 'CAN.G127.7' => 'can', 'CAN.G134.3' => 'can', 'CAN.G1468.2' => 'can', 'CAN.G1648.13' => 'can', 'CAN.G1690.3' => 'can', 'CAN.G1738.14' => 'can', 'CAN.G1739.4' => 'can', 'CAN.G316.9' => 'can', 'CAN.G356.8' => 'can', 'CAN.G386.24' => 'can', 'CAN.G413.3' => 'can', 'CAN.G413.5' => 'can', 'CAN.G673.2' => 'can', 'CAN.G781.25' => 'can', 'CAN.G889.8' => 'can', 'CAN.G895.33' => 'can', 'CAN.G895.34' => 'can', 'CAN.G930.3' => 'can', 'CAN.G939.9' => 'can', 'CANSAT16G0016' => 'cansat', 'CANSAT56G0092' => 'cansat', 'CARHR114110' => 'chi', 'CARHR114570' => 'chi', 'CARHR139230' => 'chi', 'CARHR282280' => 'chi', 'CARHR282300' => 'chi', 'CARHR282570' => 'chi', 'Carub.0004s2662' => 'cru', 'Carub.0005s0336' => 'cru', 'Carub.0008s0045' => 'cru', 'Ca_04585_v3' => 'car', 'Ca_09077_v3' => 'car', 'Ca_22805_v3' => 'car', 'Cc03_g12330' => 'ccan', 'Cc06_g21660' => 'ccan', 'CDE04G1374' => 'cde', 'CDE07G1014' => 'cde', 'Cfa005479' => 'cfa', 'Cfa005487' => 'cfa', 'Cfa009091' => 'cfa', 'Cfa026519' => 'cfa', 'Ciclev10002977m.g' => 'ccl', 'Ciclev10010272m.g' => 'ccl', 'Ciclev10016628m.g' => 'ccl', 'Ciclev10022330m.g' => 'ccl', 'Ciclev10023645m.g' => 'ccl', 'Ciclev10023703m.g' => 'ccl', 'Ciclev10024425m.g' => 'ccl', 'CiPaw.03G206200' => 'cil', 'CiPaw.06G075700' => 'cil', 'CiPaw.06G143800' => 'cil', 'CiPaw.11G073100' => 'cil', 'ClCG00G000520' => 'cla', 'ClCG00G000530' => 'cla', 'ClCG00G001500' => 'cla', 'ClCG00G001570' => 'cla', 'ClCG00G002320' => 'cla', 'ClCG02G000640' => 'cla', 'ClCG02G011190' => 'cla', 'ClCG03G011250' => 'cla', 'ClCG10G005850' => 'cla', 'ClCG10G020130' => 'cla', 'ClCG11G008150' => 'cla', 'ClCG11G010800' => 'cla', 'COL.COLO4_00283' => 'col', 'COL.COLO4_00791' => 'col', 'COL.COLO4_01433' => 'col', 'COL.COLO4_01984' => 'col', 'COL.COLO4_02516' => 'col', 'COL.COLO4_03075' => 'col', 'COL.COLO4_03148' => 'col', 'COL.COLO4_03236' => 'col', 'COL.COLO4_03279' => 'col', 'COL.COLO4_15275' => 'col', 'COL.COLO4_28163' => 'col', 'Cpa.g.sc9.275' => 'cpa', 'Cre07.g348850' => 'cre', 'Cre08.g375250' => 'cre', 'CsaV3_2G006410' => 'csa', 'CsaV3_2G018130' => 'csa', 'CsaV3_2G032570' => 'csa', 'CsaV3_UNG209010' => 'csa', 'CSS0017357' => 'camsi', 'CSS0021015' => 'camsi', 'CSS0028441' => 'camsi', 'CSS0033691' => 'camsi', 'CSS0035327' => 'camsi', 'DCAR_003450' => 'dca', 'DCAR_005218' => 'dca', 'DCAR_015262' => 'dca', 'DCAR_032444' => 'dca', 'DCAR_032526' => 'dca', 'DCAR_032527' => 'dca', 'DCAR_032528' => 'dca', 'DCAR_032548' => 'dca', 'DCAR_032549' => 'dca', 'Dinv05254' => 'din', 'Dinv06675' => 'din', 'Dinv40406' => 'din', 'Duzib128G0435' => 'dzi', 'Duzib177G0275' => 'dzi', 'ECA074G0005' => 'eca', 'ECA169G0004' => 'eca', 'ECA236G4531' => 'eca', 'ECA248G2634' => 'eca', 'EL10Ac5g10977' => 'bvu', 'EL10Ac9g22725' => 'bvu', 'EL10Ac9g22726' => 'bvu', 'EL10Ac9g22727' => 'bvu', 'EL10As2g23208' => 'bvu', 'EL10As9g23922' => 'bvu', 'Eucgr.D00430' => 'egr', 'Eucgr.H01868' => 'egr', 'Eucgr.L00051' => 'egr', 'FAN04G1833' => 'fan', 'FAN08G1475' => 'fan', 'FAN09G3743' => 'fan', 'FAN11G3319' => 'fan', 'FAN16G3476' => 'fan', 'FAN16G3539' => 'fan', 'FAN18G0695' => 'fan', 'FAN18G3733' => 'fan', 'FAN21G2204' => 'fan', 'FAN25G0193' => 'fan', 'FAN25G3328' => 'fan', 'FvH4_3g23010' => 'fve', 'FvH4_5g23230' => 'fve', 'FvH4_c3g00170' => 'fve', 'Glyma.05G150000' => 'gma', 'Glyma.08G106800' => 'gma', 'Glyma.09G155900' => 'gma', 'Glyma.10G078900' => 'gma', 'Glyma.16G206500' => 'gma', 'Glyma.18G078500' => 'gma', 'Glyma.19G051900' => 'gma', 'Glyma.19G120800' => 'gma', 'Gohir.1Z049534' => 'ghi', 'Gohir.1Z050292' => 'ghi', 'Gohir.1Z050392' => 'ghi', 'Gohir.A01G064960' => 'ghi', 'Gohir.A02G076001' => 'ghi', 'Gohir.A02G076002' => 'ghi', 'Gohir.A03G217200' => 'ghi', 'Gohir.A04G029608' => 'ghi', 'Gohir.A04G039075' => 'ghi', 'Gohir.A04G039090' => 'ghi', 'Gohir.A05G284950' => 'ghi', 'Gohir.A09G093051' => 'ghi', 'Gohir.A10G084500' => 'ghi', 'Gohir.A12G024300' => 'ghi', 'Gohir.A12G089000' => 'ghi', 'Gohir.A12G089375' => 'ghi', 'Gohir.A12G089750' => 'ghi', 'Gohir.A13G109950' => 'ghi', 'Gohir.A13G170800' => 'ghi', 'Gohir.D01G102203' => 'ghi', 'Gohir.D01G102216' => 'ghi', 'Gohir.D01G136532' => 'ghi', 'Gohir.D02G141850' => 'ghi', 'Gohir.D02G238800' => 'ghi', 'Gohir.D04G028750' => 'ghi', 'Gohir.D04G030436' => 'ghi', 'Gohir.D04G085766' => 'ghi', 'Gohir.D04G093064' => 'ghi', 'Gohir.D05G303851' => 'ghi', 'Gohir.D05G344950' => 'ghi', 'Gohir.D06G104900' => 'ghi', 'Gohir.D06G105000' => 'ghi', 'Gohir.D06G105033' => 'ghi', 'Gohir.D06G105200' => 'ghi', 'Gohir.D06G105280' => 'ghi', 'Gohir.D07G075350' => 'ghi', 'Gohir.D07G190801' => 'ghi', 'Gohir.D09G079800' => 'ghi', 'Gohir.D10G139233' => 'ghi', 'Gohir.D11G067360' => 'ghi', 'Gohir.D11G145200' => 'ghi', 'Gohir.D11G213500' => 'ghi', 'Gohir.D11G213550' => 'ghi', 'Gohir.D11G342550' => 'ghi', 'Gohir.D13G176300' => 'ghi', 'Gorai.001G079400' => 'gra', 'Gorai.001G213100' => 'gra', 'Gorai.002G165900' => 'gra', 'Gorai.002G169400' => 'gra', 'Gorai.004G123300' => 'gra', 'Gorai.005G159000' => 'gra', 'Gorai.005G167500' => 'gra', 'Gorai.005G190100' => 'gra', 'Gorai.005G267300' => 'gra', 'Gorai.007G229500' => 'gra', 'Gorai.007G372600' => 'gra', 'Gorai.013G201700' => 'gra', 'GSVIVG01010311001' => 'vvi', 'GSVIVG01013084001' => 'vvi', 'GSVIVG01023244001' => 'vvi', 'GSVIVG01023979001' => 'vvi', 'GSVIVG01023980001' => 'vvi', 'GSVIVG01027360001' => 'vvi', 'GSVIVG01038017001' => 'vvi', 'GSVIVG01038218001' => 'vvi', 'HanXRQChr00c0126g0571811' => 'han', 'HanXRQChr00c0165g0572201' => 'han', 'HanXRQChr00c0349g0573971' => 'han', 'HanXRQChr00c0368g0574191' => 'han', 'HanXRQChr00c0368g0574201' => 'han', 'HanXRQChr00c0392g0574481' => 'han', 'HanXRQChr00c0451g0574831' => 'han', 'HanXRQChr00c0454g0574921' => 'han', 'HanXRQChr00c0496g0575201' => 'han', 'HanXRQChr00c0512g0575371' => 'han', 'HanXRQChr00c0524g0575421' => 'han', 'HanXRQChr00c0533g0575581' => 'han', 'HanXRQChr00c0572g0575951' => 'han', 'HanXRQChr00c0585g0576271' => 'han', 'HanXRQChr00c0593g0576421' => 'han', 'HanXRQChr01g0017831' => 'han', 'HanXRQChr01g0020171' => 'han', 'HanXRQChr02g0053991' => 'han', 'HanXRQChr03g0073071' => 'han', 'HanXRQChr04g0127441' => 'han', 'HanXRQChr05g0150181' => 'han', 'HanXRQChr05g0152521' => 'han', 'HanXRQChr07g0190471' => 'han', 'HanXRQChr07g0194921' => 'han', 'HanXRQChr09g0256691' => 'han', 'HanXRQChr10g0284431' => 'han', 'HanXRQChr10g0284441' => 'han', 'HanXRQChr10g0299811' => 'han', 'HanXRQChr10g0318001' => 'han', 'HanXRQChr10g0318011' => 'han', 'HanXRQChr11g0321151' => 'han', 'HanXRQChr11g0321161' => 'han', 'HanXRQChr11g0326561' => 'han', 'HanXRQChr11g0327021' => 'han', 'HanXRQChr11g0327071' => 'han', 'HanXRQChr11g0337241' => 'han', 'HanXRQChr11g0352351' => 'han', 'HanXRQChr12g0369901' => 'han', 'HanXRQChr13g0413481' => 'han', 'HanXRQChr13g0413521' => 'han', 'HanXRQChr13g0413541' => 'han', 'HanXRQChr13g0416611' => 'han', 'HanXRQChr14g0438981' => 'han', 'HanXRQChr15g0488331' => 'han', 'HanXRQChr15g0494391' => 'han', 'HanXRQChr17g0559921' => 'han', 'HanXRQCPg0580231' => 'han', 'HanXRQCPg0580491' => 'han', 'Haze_12122' => 'cav', 'Haze_26884' => 'cav', 'Hma1.2p1_0062F.1_g034240' => 'hma', 'Hma1.2p1_0062F.1_g034245' => 'hma', 'Hma1.2p1_0108F.1_g051970' => 'hma', 'Hma1.2p1_0192F.1_g083720' => 'hma', 'Hma1.2p1_0192F.1_g083730' => 'hma', 'Hma1.2p1_0247F.1_g101830' => 'hma', 'Hma1.2p1_0247F.1_g101832' => 'hma', 'Hma1.2p1_0298F.1_g117732' => 'hma', 'Hma1.2p1_0298F.1_g117734' => 'hma', 'Hma1.2p1_0818F.1_g223303' => 'hma', 'Hma1.2p1_1606F.1_g293400' => 'hma', 'Hma1.2p1_4210F.1_g338458' => 'hma', 'HPP92_028388' => 'vpl', 'HPP92_028438' => 'vpl', 'Hund02661' => 'sun', 'Hund03952' => 'sun', 'Hund04059' => 'sun', 'Hund07704' => 'sun', 'Hund07747' => 'sun', 'Hund08205' => 'sun', 'Hund08800' => 'sun', 'Hund16193' => 'sun', 'Hund17911' => 'sun', 'Hund17912' => 'sun', 'Hund18094' => 'sun', 'Hund19321' => 'sun', 'Hund26846' => 'sun', 'Hund26847' => 'sun', 'Hund27443' => 'sun', 'Hund27468' => 'sun', 'Hund27477' => 'sun', 'Hund27580' => 'sun', 'Hund27591' => 'sun', 'Hund27592' => 'sun', 'Hund27891' => 'sun', 'Hund27925' => 'sun', 'Hund27964' => 'sun', 'Hund27965' => 'sun', 'Hund27987' => 'sun', 'Hund28043' => 'sun', 'Hund28044' => 'sun', 'Hund28111' => 'sun', 'Hund28270' => 'sun', 'Hund28322' => 'sun', 'Hund28461' => 'sun', 'Hund28462' => 'sun', 'Hund28464' => 'sun', 'Hund28465' => 'sun', 'Hund28484' => 'sun', 'Hund28521' => 'sun', 'Hund28531' => 'sun', 'Hund28634' => 'sun', 'Hund28635' => 'sun', 'Hund28680' => 'sun', 'Hund28762' => 'sun', 'Hund28776' => 'sun', 'Hund28848' => 'sun', 'Hund28897' => 'sun', 'Hund29024' => 'sun', 'Hund29039' => 'sun', 'Hund29040' => 'sun', 'Hund29053' => 'sun', 'Hund29166' => 'sun', 'Hund29219' => 'sun', 'Hund29220' => 'sun', 'Hund29230' => 'sun', 'Hund29235' => 'sun', 'Hund29358' => 'sun', 'Hund29501' => 'sun', 'Hund29502' => 'sun', 'Hund29527' => 'sun', 'Hund29528' => 'sun', 'Hund29529' => 'sun', 'Hund29539' => 'sun', 'Hund29541' => 'sun', 'Hund29545' => 'sun', 'Hund29546' => 'sun', 'Hund29556' => 'sun', 'Hund29559' => 'sun', 'Hund29563' => 'sun', 'Hund29569' => 'sun', 'Hund29570' => 'sun', 'Hund29581' => 'sun', 'Hund29595' => 'sun', 'Hund29598' => 'sun', 'Hund29607' => 'sun', 'Hund29608' => 'sun', 'Hund29614' => 'sun', 'Hund29615' => 'sun', 'Hund29662' => 'sun', 'Hund29663' => 'sun', 'Hund29874' => 'sun', 'Hund29959' => 'sun', 'Hund29960' => 'sun', 'Hund30109' => 'sun', 'Hund30110' => 'sun', 'Hund30113' => 'sun', 'Hund30114' => 'sun', 'Hund30117' => 'sun', 'Hund30145' => 'sun', 'Hund30214' => 'sun', 'Hund30227' => 'sun', 'Hund30274' => 'sun', 'Hund30275' => 'sun', 'Hund30357' => 'sun', 'Hund30492' => 'sun', 'Hund30493' => 'sun', 'Hund30541' => 'sun', 'Hund30580' => 'sun', 'Hund30581' => 'sun', 'Hund30682' => 'sun', 'Hund30722' => 'sun', 'Hund30736' => 'sun', 'Hund31003' => 'sun', 'Hund31045' => 'sun', 'Hund31296' => 'sun', 'Lalb_Chr04g0262291' => 'lal', 'Lalb_Chr07g0191961' => 'lal', 'Lalb_Chr07g0191971' => 'lal', 'Lalb_Chr07g0191991' => 'lal', 'Lalb_Chr07g0192331' => 'lal', 'Lalb_Chr07g0192561' => 'lal', 'Lalb_Chr07g0192571' => 'lal', 'Lalb_Chr10g0097221' => 'lal', 'Lalb_Chr13g0292571' => 'lal', 'Lalb_Chr13g0292941' => 'lal', 'Lalb_Chr18g0049531' => 'lal', 'Lalb_Chr23g0274281' => 'lal', 'Lalb_Chr25g0279121' => 'lal', 'Lalb_Chr25g0281971' => 'lal', 'Lalb_Chr25g0281981' => 'lal', 'Lalb_Chr25g0283401' => 'lal', 'Lj2A1229G102' => 'lonja', 'Lj2A1237G139' => 'lonja', 'Lj2A1239T189' => 'lonja', 'Lj2C1234T10' => 'lonja', 'Lj2P692T49' => 'lonja', 'Lj3g0015602' => 'lja', 'Lj4g0011801' => 'lja', 'Lj4g0015929' => 'lja', 'Lj6g0002539' => 'lja', 'LjContig00318g0005310' => 'lja', 'LjContig00318g0022660' => 'lja', 'LjContig00318g0024302' => 'lja', 'LjContig00318g0024355' => 'lja', 'LjContig00319g0005990' => 'lja', 'LjContig00319g0017169' => 'lja', 'LjContig00319g0019337' => 'lja', 'LjContig00319g0021781' => 'lja', 'LjContig00489g0007784' => 'lja', 'LjContig00489g0018536' => 'lja', 'Lju470C11G7' => 'lonja', 'Lju5009A0T62' => 'lonja', 'Lsat_1_v5_gn_0_28060' => 'lsa', 'Lsat_1_v5_gn_0_41560' => 'lsa', 'Lsat_1_v5_gn_3_113260' => 'lsa', 'Lsat_1_v5_gn_3_22600' => 'lsa', 'Lsat_1_v5_gn_3_85920' => 'lsa', 'Lsat_1_v5_gn_3_85960' => 'lsa', 'Lsat_1_v5_gn_4_5521' => 'lsa', 'Lsat_1_v5_gn_5_185760' => 'lsa', 'Lsat_1_v5_gn_5_27641' => 'lsa', 'Lsat_1_v5_gn_5_27661' => 'lsa', 'Lsat_1_v5_gn_5_50501' => 'lsa', 'Lsat_1_v5_gn_6_40840' => 'lsa', 'Lsat_1_v5_gn_7_110000' => 'lsa', 'Lsat_1_v5_gn_7_82641' => 'lsa', 'Lsat_1_v5_gn_7_82661' => 'lsa', 'Lsat_1_v5_gn_8_116600' => 'lsa', 'Lsat_1_v5_gn_8_38320' => 'lsa', 'Lsat_1_v5_gn_9_86700' => 'lsa', 'Manes.04G058472' => 'mes', 'Manes.04G058904' => 'mes', 'Manes.04G059768' => 'mes', 'Manes.04G068100' => 'mes', 'Manes.07G029100' => 'mes', 'Manes.08G081822' => 'mes', 'Manes.09G076414' => 'mes', 'Manes.09G076548' => 'mes', 'Manes.11G105900' => 'mes', 'Manes.17G014150' => 'mes', 'Manes.18G141600' => 'mes', 'Mapoly0001s0275' => 'mpo', 'Mapoly0157s0025' => 'mpo', 'MBI05_g05350_MAGBIO' => 'mbi', 'MBI12_g18825_MAGBIO' => 'mbi', 'MBI12_g18826_MAGBIO' => 'mbi', 'MBI12_g23294_MAGBIO' => 'mbi', 'MBI12_g26680_MAGBIO' => 'mbi', 'MBI16_g09479_MAGBIO' => 'mbi', 'MCO06G213' => 'mco', 'MD02G1002800' => 'mdo', 'MD02G1217700' => 'mdo', 'MD05G1054100' => 'mdo', 'MD07G1100000' => 'mdo', 'MD15G1146000' => 'mdo', 'Medtr0002s0350' => 'mtr', 'Medtr0002s0360' => 'mtr', 'Medtr0002s0800' => 'mtr', 'Medtr0082s0210' => 'mtr', 'Medtr1g075450' => 'mtr', 'Medtr2g015360' => 'mtr', 'Medtr2g098600' => 'mtr', 'Medtr3g035700' => 'mtr', 'Medtr3g035710' => 'mtr', 'Medtr3g035720' => 'mtr', 'Medtr3g037420' => 'mtr', 'Medtr4g047905' => 'mtr', 'Medtr4g047920' => 'mtr', 'Medtr4g051420' => 'mtr', 'Medtr4g051430' => 'mtr', 'Medtr4g124720' => 'mtr', 'Medtr4g127750' => 'mtr', 'Medtr5g085270' => 'mtr', 'Medtr7g106780' => 'mtr', 'Medtr8g038480' => 'mtr', 'Medtr8g102110' => 'mtr', 'Medtr8g466190' => 'mtr', 'MELO3C000111.2' => 'cme', 'MELO3C001415.2' => 'cme', 'MELO3C006906.2' => 'cme', 'MELO3C011310.2' => 'cme', 'MELO3C020549.2' => 'cme', 'MELO3C023260.2' => 'cme', 'MELO3C027614.2' => 'cme', 'MELO3C028091.2' => 'cme', 'MELO3C028092.2' => 'cme', 'MELO3C033732.2' => 'cme', 'MELO3C035264.2' => 'cme', 'Migut.D01325' => 'egut', 'Migut.D01371' => 'egut', 'Migut.D01406' => 'egut', 'Migut.J00430' => 'egut', 'Migut.K00974' => 'egut', 'Migut.N01825' => 'egut', 'Migut.O00530' => 'egut', 'MSTRG.14604' => 'ama', 'Nitab4.5_0000030g0510' => 'nta', 'Nitab4.5_0000031g0230' => 'nta', 'Nitab4.5_0000100g0080' => 'nta', 'Nitab4.5_0000197g0060' => 'nta', 'Nitab4.5_0000334g0010' => 'nta', 'Nitab4.5_0000351g0280' => 'nta', 'Nitab4.5_0000750g0010' => 'nta', 'Nitab4.5_0000859g0060' => 'nta', 'Nitab4.5_0000859g0080' => 'nta', 'Nitab4.5_0001152g1010' => 'nta', 'Nitab4.5_0001153g0100' => 'nta', 'Nitab4.5_0001522g0100' => 'nta', 'Nitab4.5_0001646g0040' => 'nta', 'Nitab4.5_0001783g0150' => 'nta', 'Nitab4.5_0001783g0160' => 'nta', 'Nitab4.5_0002380g0070' => 'nta', 'Nitab4.5_0002418g0100' => 'nta', 'Nitab4.5_0002418g0220' => 'nta', 'Nitab4.5_0003083g0050' => 'nta', 'Nitab4.5_0004376g0130' => 'nta', 'Nitab4.5_0004376g0180' => 'nta', 'Nitab4.5_0004864g0050' => 'nta', 'Nitab4.5_0006806g0140' => 'nta', 'Nitab4.5_0007095g0020' => 'nta', 'Nitab4.5_0009703g0070' => 'nta', 'Nitab4.5_0010611g0020' => 'nta', 'Nitab4.5_0011987g0020' => 'nta', 'Nitab4.5_0012158g0070' => 'nta', 'Nitab4.5_0013360g0020' => 'nta', 'Nitab4.5_0014666g0020' => 'nta', 'Nitab4.5_0014666g0090' => 'nta', 'Nitab4.5_0020349g0040' => 'nta', 'Nitab4.5_0020349g0050' => 'nta', 'Nn020s41485' => 'nnu', 'Nn020s41487' => 'nnu', 'Nn021s41514' => 'nnu', 'Nn021s41516' => 'nnu', 'Nn021s41517' => 'nnu', 'Nn070s42375' => 'nnu', 'Nn070s42376' => 'nnu', 'Nn145s44091' => 'nnu', 'Nn145s44093' => 'nnu', 'Nn1g04854' => 'nnu', 'Nn1g08182' => 'nnu', 'Nn1g08183' => 'nnu', 'Nn1g08201' => 'nnu', 'Nn1g09992' => 'nnu', 'Nn1g10001' => 'nnu', 'Nn1g10092' => 'nnu', 'Nn3g16150' => 'nnu', 'Nn3g16152' => 'nnu', 'Nn4g25228' => 'nnu', 'Nn4g25229' => 'nnu', 'Nn4g25231' => 'nnu', 'Nn4g25233' => 'nnu', 'Nn5g27211' => 'nnu', 'Nn5g27213' => 'nnu', 'Nn6g31740' => 'nnu', 'Nn6g34181' => 'nnu', 'Oeu015119.1' => 'oeu', 'Oeu028768.1' => 'oeu', 'Oeu054373.3' => 'oeu', 'Oeu058355.1' => 'oeu', 'Oeu059001.1' => 'oeu', 'Oeu062848.1' => 'oeu', 'Oeu062849.1' => 'oeu', 'Oeu062870.1' => 'oeu', 'Os10g0214132' => 'osa', 'Peaxi162Scf00193g00722' => 'pax', 'Peaxi162Scf00211g00236' => 'pax', 'Peaxi162Scf00211g00237' => 'pax', 'Peaxi162Scf00299g00117' => 'pax', 'Peaxi162Scf00336g00012' => 'pax', 'Peaxi162Scf00483g00319' => 'pax', 'Peaxi162Scf00525g00033' => 'pax', 'PGR042G1849' => 'pgr', 'PGR083G1454' => 'pgr', 'PGR111G0007' => 'pgr', 'PGR111G0020' => 'pgr', 'PGR111G0050' => 'pgr', 'PGR111G0101' => 'pgr', 'PGR111G0124' => 'pgr', 'PGSC0003DMG400021035' => 'stu', 'Phvul.001G167500' => 'pvu', 'Phvul.001G180400' => 'pvu', 'Phvul.002G275900' => 'pvu', 'Phvul.004G070000' => 'pvu', 'Phvul.007G164000' => 'pvu', 'Phvul.009G261200' => 'pvu', 'Potri.005G154300' => 'ptr', 'Potri.005G154350' => 'ptr', 'Potri.005G154674' => 'ptr', 'Potri.007G142200' => 'ptr', 'Potri.011G074301' => 'ptr', 'Potri.011G074401' => 'ptr', 'Potri.013G129600' => 'ptr', 'Potri.013G136466' => 'ptr', 'Potri.013G137077' => 'ptr', 'Potri.013G137688' => 'ptr', 'Potri.013G138612' => 'ptr', 'Potri.017G007700' => 'ptr', 'Potri.019G013302' => 'ptr', 'Potri.019G101950' => 'ptr', 'Pp3c2_23491' => 'ppa', 'PRCOL_00003527' => 'pco', 'Prupe.2G123500' => 'ppe', 'Prupe.3G126000' => 'ppe', 'Prupe.4G266600' => 'ppe', 'Prupe.7G268400' => 'ppe', 'Psat0s3650g0280' => 'psa', 'Psat0s3813g0040' => 'psa', 'Psat0s6638g0120' => 'psa', 'Psat1g200400' => 'psa', 'Psat2g025600' => 'psa', 'Psat4g009760' => 'psa', 'Psat4g113360' => 'psa', 'Psat5g168120' => 'psa', 'Psat5g168160' => 'psa', 'Psat6g032760' => 'psa', 'PSO210G2245' => 'pso', 'PSO349G0315' => 'pso', 'PSO541G1563' => 'pso', 'PSO548G0068' => 'pso', 'PSO548G0098' => 'pso', 'PSO548G0119' => 'pso', 'PSO675G4368' => 'pso', 'PSO675G7318' => 'pso', 'QL02p099946' => 'qlo', 'QL06p014848' => 'qlo', 'QL09p020955' => 'qlo', 'QL09p021108' => 'qlo', 'RcHm_v2.0_Chr1g0329571' => 'rch', 'RcHm_v2.0_Chr1g0329581' => 'rch', 'RcHm_v2.0_Chr2g0118491' => 'rch', 'RcHm_v2.0_Chr2g0118501' => 'rch', 'RcHm_v2.0_Chr2g0118521' => 'rch', 'RcHm_v2.0_Chr2g0118531' => 'rch', 'RcHm_v2.0_Chr3g0480391' => 'rch', 'RcHm_v2.0_Chr3g0482311' => 'rch', 'RcHm_v2.0_Chr5g0040401' => 'rch', 'RcHm_v2.0_Chr7g0202851' => 'rch', 'RcHm_v2.0_Chr7g0212161' => 'rch', 'RcHm_v2.0_CPg0501831' => 'rch', 'RcHm_v2.0_CPg0502561' => 'rch', 'RcHm_v2.0_CPg0502581' => 'rch', 'RcHm_v2.0_CPg0502591' => 'rch', 'Rhsim02G0157400' => 'rsi', 'Rhsim09G0005400' => 'rsi', 'Rhsim11G0036800' => 'rsi', 'RhsimMtG0002500' => 'rsi', 'Sabra04G0097500' => 'sbr', 'Sabra07G0114000' => 'sbr', 'Sabra07G0116900' => 'sbr', 'Sabra10G0056100' => 'sbr', 'Sabra13G0107600' => 'sbr', 'Sabra17G0008500' => 'sbr', 'Sabra19G0113200' => 'sbr', 'SabraMtG0004900' => 'sbr', 'SabraPtG0004400' => 'sbr', 'SabraPtG0007100' => 'sbr', 'SalBow1G0808' => 'sbo', 'SalBow1G1016' => 'sbo', 'SalBow1G1228' => 'sbo', 'SalBow1G1399' => 'sbo', 'SalBow1G3106' => 'sbo', 'SalBow3G4155' => 'sbo', 'Sc05g0004100' => 'sci', 'Sc05g0004110' => 'sci', 'Sc06g0008940' => 'sci', 'Sc10g0009940' => 'sci', 'Sc13g0007000' => 'sci', 'Sc16g0004470' => 'sci', 'Sc25g0002530' => 'sci', 'ScUNg0001310' => 'sci', 'Sed0002289' => 'sed', 'Sed0002965' => 'sed', 'Sed0004093' => 'sed', 'Sed0004583' => 'sed', 'Sed0005561' => 'sed', 'Sed0006593' => 'sed', 'Sed0007321' => 'sed', 'Sed0008426' => 'sed', 'Sed0011584' => 'sed', 'Sed0012077' => 'sed', 'Sed0012390' => 'sed', 'Sed0013350' => 'sed', 'Sed0015411' => 'sed', 'Sed0017282' => 'sed', 'Sed0018807' => 'sed', 'Sed0019752' => 'sed', 'Sed0022172' => 'sed', 'Sed0026411' => 'sed', 'SEGI_00474' => 'sgi', 'SEGI_01858' => 'sgi', 'SEGI_06953' => 'sgi', 'SEGI_10646' => 'sgi', 'SEGI_13221' => 'sgi', 'SEGI_16786' => 'sgi', 'SEGI_21115' => 'sgi', 'SEGI_22754' => 'sgi', 'SEGI_26563' => 'sgi', 'SEGI_27798' => 'sgi', 'SEGI_29323' => 'sgi', 'SEGI_29658' => 'sgi', 'SEGI_30011' => 'sgi', 'SEGI_31174' => 'sgi', 'SEGI_32412' => 'sgi', 'SEGI_32762' => 'sgi', 'SEGI_35211' => 'sgi', 'SEGI_36078' => 'sgi', 'SEGI_40930' => 'sgi', 'SEGI_41075' => 'sgi', 'SGA_v2.0_scaffold123G33382' => 'sas', 'SGA_v2.0_scaffold141G35548' => 'sas', 'SGA_v2.0_scaffold221G42697' => 'sas', 'SGA_v2.0_scaffold2G01038' => 'sas', 'SGA_v2.0_scaffold477G52164' => 'sas', 'SGA_v2.0_scaffold507G52537' => 'sas', 'SGA_v2.0_scaffold61G21222' => 'sas', 'SGA_v2.0_scaffold907G53718' => 'sas', 'SHI25564' => 'shi', 'SHI25681' => 'shi', 'SHI27340' => 'shi', 'SHI29249' => 'shi', 'SHI31828' => 'shi', 'SHI34608' => 'shi', 'SHI34610' => 'shi', 'SHI34620' => 'shi', 'SHI34991' => 'shi', 'SHI35194' => 'shi', 'SHI35858' => 'shi', 'SHI36701' => 'shi', 'SHI36893' => 'shi', 'SHI37000' => 'shi', 'SHI37206' => 'shi', 'SHI37207' => 'shi', 'SHI37326' => 'shi', 'SHI37554' => 'shi', 'SHI37829' => 'shi', 'SHI37858' => 'shi', 'SHI37868' => 'shi', 'SHI37876' => 'shi', 'SHI37890' => 'shi', 'SHI37891' => 'shi', 'SHI37906' => 'shi', 'SHI37965' => 'shi', 'SHI38037' => 'shi', 'SHI38050' => 'shi', 'SHI38052' => 'shi', 'SHI38194' => 'shi', 'SHI38319' => 'shi', 'SHI38387' => 'shi', 'SHI38471' => 'shi', 'SHI38513' => 'shi', 'SHI38534' => 'shi', 'SHI38535' => 'shi', 'SHI38589' => 'shi', 'SHI38605' => 'shi', 'SHI38868' => 'shi', 'SHI38983' => 'shi', 'SHI40214' => 'shi', 'SHI40340' => 'shi', 'SHI40537' => 'shi', 'SHI40550' => 'shi', 'SHI40568' => 'shi', 'SHI41065' => 'shi', 'SHI41069' => 'shi', 'SHI43265' => 'shi', 'SHI43312' => 'shi', 'SHI44879' => 'shi', 'SHI45733' => 'shi', 'SHI46605' => 'shi', 'SHI47944' => 'shi', 'SHI47945' => 'shi', 'SHI48062' => 'shi', 'SHI49464' => 'shi', 'SHI49875' => 'shi', 'SHI50002' => 'shi', 'SHI50503' => 'shi', 'SHI50522' => 'shi', 'SHI50600' => 'shi', 'SHI51026' => 'shi', 'SHI51272' => 'shi', 'SHI53038' => 'shi', 'SHI53542' => 'shi', 'SHI54100' => 'shi', 'SHI54850' => 'shi', 'SHI54942' => 'shi', 'SMO086G0012' => 'smo', 'SMO086G0036' => 'smo', 'SMO086G0037' => 'smo', 'SMO164G0209' => 'smo', 'SMO340G0111' => 'smo', 'SMO358G0711' => 'smo', 'Solyc00g500035.1' => 'sly', 'Solyc00g500036.1' => 'sly', 'Solyc00g500047.1' => 'sly', 'Solyc00g500079.1' => 'sly', 'Solyc00g500080.1' => 'sly', 'Solyc00g500150.1' => 'sly', 'Solyc00g500152.1' => 'sly', 'Solyc00g500273.1' => 'sly', 'Solyc00g500297.1' => 'sly', 'Solyc00g500298.1' => 'sly', 'Solyc02g150102.1' => 'sly', 'Solyc05g023730.1' => 'sly', 'Solyc05g045760.1' => 'sly', 'Solyc05g045820.1' => 'sly', 'Solyc08g075410.3' => 'sly', 'Solyc09g050067.1' => 'sly', 'Solyc09g050068.1' => 'sly', 'Solyc10g012217.1' => 'sly', 'Solyc10g018610.2' => 'sly', 'Solyc10g047090.2' => 'sly', 'Solyc12g035810.1' => 'sly', 'Sopen08g024040' => 'spe', 'Sopen10g009090' => 'spe', 'Sp3g21530' => 'spa', 'Sp4g26150' => 'spa', 'Sp7g05780' => 'spa', 'TAR048G0002' => 'tar', 'THA.LOC109116503' => 'tha', 'THA.LOC109116845' => 'tha', 'Thecc.02G009100' => 'tca', 'Thecc.04G028400' => 'tca', 'Thhalv10001757m.g' => 'esa', 'Thhalv10001832m.g' => 'esa', 'Thhalv10002665m.g' => 'esa', 'Thhalv10026807m.g' => 'esa', 'Thhalv10028045m.g' => 'esa', 'TPR.G11771' => 'tpr', 'TPR.G24812' => 'tpr', 'TPR.G25660' => 'tpr', 'TPR.G34443' => 'tpr', 'TPR.G37391' => 'tpr', 'TWI60G1067' => 'twi', 'unitig_578.g16271' => 'ugi', 'unitig_736.g22738' => 'ugi', 'unitig_91.g26490' => 'ugi', 'unitig_91.g26514' => 'ugi', 'unitig_91.g26531' => 'ugi', 'vmacro16408' => 'vma', 'VMungo0464G1581' => 'vmu', 'VMungo0706G0001' => 'vmu', 'VMungo1127G0887' => 'vmu', 'Zm00001eb003570' => 'zma', 'Zm00001eb016030' => 'zma', 'Zm00001eb049250' => 'zma', 'Zm00001eb070540' => 'zma', 'Zm00001eb085020' => 'zma', 'Zm00001eb141660' => 'zma', 'Zm00001eb180350' => 'zma', 'Zm00001eb184820' => 'zma', 'Zm00001eb205150' => 'zma', 'Zm00001eb219510' => 'zma', 'Zm00001eb255920' => 'zma', 'Zm00001eb271690' => 'zma', 'Zm00001eb318380' => 'zma', 'Zm00001eb321840' => 'zma', 'Zm00001eb321850' => 'zma', 'Zm00001eb380740' => 'zma', 'Zm00001eb419660' => 'zma', 'Zm00001eb434700' => 'zma', 'Zm00001eb434810' => 'zma', 'Zm00001eb434860' => 'zma', 'Zm00001eb435120' => 'zma', 'Zm00001eb435350' => 'zma', 'Zm00001eb435630' => 'zma', 'Zm00001eb437090' => 'zma', 'Zm00001eb437320' => 'zma', 'Zm00001eb437950' => 'zma', 'Zm00001eb439920' => 'zma', 'Zm00001eb439930' => 'zma', 'Zm00001eb439950' => 'zma', 'Zm00001eb443000' => 'zma' ) $gf_id = 'HOM05D000540' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000540' ) $data_identifier = 'HOM05D000540' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 17, 'aar' => (int) 1, 'aag' => (int) 2, 'ach' => (int) 3, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 2, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 3, 'acertr' => (int) 4, 'cqu' => (int) 2, 'bca' => (int) 12, 'bol' => (int) 33, 'bra' => (int) 20, 'can' => (int) 22, 'cansat' => (int) 2, 'chi' => (int) 6, 'cru' => (int) 3, 'car' => (int) 3, 'ccan' => (int) 2, 'cde' => (int) 2, 'cfa' => (int) 4, 'ccl' => (int) 7, 'cil' => (int) 4, 'cla' => (int) 12, 'col' => (int) 11, 'cpa' => (int) 1, 'cre' => (int) 2, 'csa' => (int) 4, 'camsi' => (int) 5, 'dca' => (int) 9, 'din' => (int) 3, 'dzi' => (int) 2, 'eca' => (int) 4, 'bvu' => (int) 6, 'egr' => (int) 3, 'fan' => (int) 11, 'fve' => (int) 3, 'gma' => (int) 8, 'ghi' => (int) 45, 'gra' => (int) 12, 'vvi' => (int) 8, 'han' => (int) 48, 'cav' => (int) 2, 'hma' => (int) 12, 'vpl' => (int) 2, 'sun' => (int) 102, 'lal' => (int) 16, 'lonja' => (int) 7, 'lja' => (int) 14, 'lsa' => (int) 18, 'mes' => (int) 11, 'mpo' => (int) 2, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 5, 'mtr' => (int) 22, 'cme' => (int) 11, 'egut' => (int) 7, 'ama' => (int) 1, 'nta' => (int) 33, 'nnu' => (int) 26, 'oeu' => (int) 8, 'osa' => (int) 1, 'pax' => (int) 7, 'pgr' => (int) 7, 'stu' => (int) 1, 'pvu' => (int) 6, 'ptr' => (int) 14, 'ppa' => (int) 1, 'pco' => (int) 1, 'ppe' => (int) 4, 'psa' => (int) 10, 'pso' => (int) 8, 'qlo' => (int) 4, 'rch' => (int) 15, 'rsi' => (int) 4, 'sbr' => (int) 10, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 18, 'sgi' => (int) 20, 'sas' => (int) 8, 'shi' => (int) 68, 'smo' => (int) 6, 'sly' => (int) 21, 'spe' => (int) 2, 'spa' => (int) 3, 'tar' => (int) 1, 'tha' => (int) 2, 'tca' => (int) 2, 'esa' => (int) 5, 'tpr' => (int) 5, 'twi' => (int) 1, 'ugi' => (int) 5, 'vma' => (int) 1, 'vmu' => (int) 3, 'zma' => (int) 30 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb443000' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1